STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS2Bardet-Biedl syndrome 2 protein homolog. (721 aa)    
Predicted Functional Partners:
BBS9
Protein PTHB1.
   
 0.995
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
  
0.995
TTC8
Tetratricopeptide repeat protein 8.
  
 0.991
BBS4
Bardet-Biedl syndrome 4 protein.
   
 0.991
BBS5
Bardet-Biedl syndrome 5.
    
 0.940
LZTFL1
Leucine zipper transcription factor-like protein 1.
   
 0.926
KLHL41
Kelch-like protein 41.
    
 0.891
KLHL40
Kelch-like protein 40.
    
 0.859
BBIP1
BBSome-interacting protein 1.
    
 
 0.747
MCHR1
Melanin-concentrating hormone receptor 1.
     
 0.672
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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