STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS2Bardet-Biedl syndrome 2 protein homolog. (721 aa)    
Predicted Functional Partners:
BBS9
Protein PTHB1.
   
 0.999
TTC8
Tetratricopeptide repeat protein 8.
  
 
 0.999
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
  
0.999
BBS4
Bardet-Biedl syndrome 4 protein.
    
 0.998
LZTFL1
Leucine zipper transcription factor-like protein 1.
    
 0.992
BBS5
Bardet-Biedl syndrome 5.
    
 0.989
KLHL41
Kelch-like protein 41.
    
 0.967
KLHL40
Kelch-like protein 40.
    
 0.928
BBS12
Bardet-Biedl syndrome 12 protein.
    
 0.896
BBIP1
BBSome-interacting protein 1.
    
 0.895
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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