STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPP2Secreted phosphoprotein 24. (191 aa)    
Predicted Functional Partners:
AHSG
Alpha-2-HS-glycoprotein.
   
  
 0.710
APOH
Beta-2-glycoprotein 1.
   
 
 0.614
FAM20C
Extracellular serine/threonine protein kinase FAM20C.
    
  0.608
CLEC3B
Tetranectin.
   
 
 0.586
IGFBP1
Insulin-like growth factor-binding protein 1.
   
    0.563
FGA
Fibrinogen alpha chain.
   
  
 0.551
TAPT1
Transmembrane anterior posterior transformation protein 1.
   
  
 0.542
CMPK1
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors. Also displays broad nucleoside diphosphate kinase activity; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
      
 0.518
HGD
Homogentisate 1,2-dioxygenase.
   
    0.469
SERPINC1
Antithrombin-III; Belongs to the serpin family.
   
 
 0.452
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.