STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPP2Secreted phosphoprotein 24. (191 aa)    
Predicted Functional Partners:
AHSG
Alpha-2-HS-glycoprotein.
   
  
 0.725
FGA
Fibrinogen alpha chain.
   
  
 0.666
HGD
Homogentisate 1,2-dioxygenase.
   
    0.631
CPB2
Carboxypeptidase B2.
   
  
 0.616
CLEC3B
Tetranectin.
   
 
 0.606
APOH
Beta-2-glycoprotein 1.
   
 
 0.583
RAD1
Cell cycle checkpoint protein RAD1.
      
 0.582
DNMBP
Dynamin-binding protein.
      
 0.566
CUX1
Homeobox protein cut-like.
      
 0.543
IGFBP1
Insulin-like growth factor-binding protein 1.
   
 
  0.541
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.