Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CABP1Calcium-binding protein 1. (412 aa)    
Predicted Functional Partners:
NPHP3
Nephrocystin-3.
    
 0.826
ARL3
ADP-ribosylation factor-like protein 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.776
AK9
Adenylate kinase 9.
    
 
 0.740
UNC119
Protein unc-119 A.
   
   0.649
RP2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
     
  0.610
PRIMA1
Proline-rich membrane anchor 1.
      
 0.568
WDR90
WD repeat-containing protein 90.
   
 0.543
BBS9
Protein PTHB1.
      
 0.525
AVPI1
Arginine vasopressin induced 1.
    
   0.515
RNF34
E3 ubiquitin-protein ligase RNF34.
   
   0.512
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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