Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPA2B1Heterogeneous nuclear ribonucleoproteins A2/B1. (445 aa)    
Predicted Functional Partners:
HNRNPC
Heterogeneous nuclear ribonucleoprotein C-like 1.
   
 0.998
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.998
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.985
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D-like.
   
 0.979
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.976
HNRNPH1
Heterogeneous nuclear ribonucleoprotein H.
   
 0.972
MT-CO3
Mitochondrially encoded cytochrome c oxidase III.
   
  
 0.970
MT-CYB
Mitochondrially encoded cytochrome b.
   
   0.970
MT-CO1
Mitochondrially encoded cytochrome c oxidase I.
   
    0.969
MT-CO2
Mitochondrially encoded cytochrome c oxidase II.
   
    0.969
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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