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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PARNPoly(A)-specific ribonuclease PARN. (638 aa)    
Predicted Functional Partners:
PNLDC1
Poly(A)-specific ribonuclease PARN-like domain-containing protein 1.
     
0.902
DCP2
M7GpppN-mRNA hydrolase.
     
 0.767
DIS3L2
DIS3-like exonuclease 2; Belongs to the RNR ribonuclease family.
     
 0.696
EXOSC5
Exosome complex component RRP46.
     
 0.689
EXOSC6
Exosome complex component MTR3.
     
 0.670
EXOSC3
Exosome complex component RRP40.
     
 0.665
EXOSC4
Exosome complex component RRP41.
     
 0.656
EXOSC7
Exosome complex component RRP42.
     
 0.654
DIS3
Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family.
     
 0.632
SYMPK
Symplekin.
    
 
 0.606
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.