Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
PARNPoly(A)-specific ribonuclease PARN. (638 aa)    
Predicted Functional Partners:
DCP2
M7GpppN-mRNA hydrolase.
     
 0.936
DHX37
Putative ATP-dependent RNA helicase DHX37.
    
 
 0.923
PNLDC1
Poly(A)-specific ribonuclease PARN-like domain-containing protein 1.
     
0.903
BYSL
Bystin.
   
   0.856
FAM207A
Protein FAM207A.
    
   0.854
UTP14A
U3 small nucleolar RNA-associated protein 14 A.
    
   0.829
RPLP1
60S acidic ribosomal protein P1; Belongs to the eukaryotic ribosomal protein P1/P2 family.
      
 0.801
XRN1
5'-3' exoribonuclease 1.
    
 
 0.794
NOCT
Nocturnin.
      
 0.711
EXOSC4
Exosome complex component RRP41.
    
 0.689
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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