STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD44Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B. (1060 aa)    
Predicted Functional Partners:
PPP6C
Serine/threonine-protein phosphatase.
    
 0.881
PPP6R2
Serine/threonine-protein phosphatase 6 regulatory subunit 2.
   
 0.762
PPP6R3
Serine/threonine-protein phosphatase 6 regulatory subunit 3.
   
 0.762
USP10
Ubiquitin carboxyl-terminal hydrolase.
   
   0.631
ENO4
Enolase-like protein ENO4.
    
 
 0.540
CEP170B
Centrosomal protein B.
    
 0.527
NOTCH1
Neurogenic locus notch 1.
   
  0.488
ANKRD52
Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C.
    
 0.450
PLA2G7
Platelet-activating factor acetylhydrolase.
      
 0.434
TRAPPC8
Trafficking protein particle complex subunit 8.
    
 
 0.419
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.