STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110480108Phosphatidylinositol-binding clathrin assembly protein. (683 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
   
 0.990
ITSN2
Intersectin-2.
    
 0.979
ITSN1
Intersectin-1.
    
 0.969
AP2M1
AP-2 complex subunit mu; Belongs to the adaptor complexes medium subunit family.
    
 0.749
UBA52
Ubiquitin-60S ribosomal protein L40.
    
  0.731
STON2
Stonin-2; Belongs to the Stoned B family.
    
 0.702
HIP1R
Huntingtin-interacting protein 1-related protein.
    
 0.692
SORL1
Sortilin-related receptor.
     
 0.689
VAMP3
Vesicle-associated membrane protein 3.
   
 0.674
EPS15L1
Epidermal growth factor receptor substrate 15-like 1.
    
 0.674
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.