Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001212annotation not available (380 aa)    
Predicted Functional Partners:
MEAF6
Chromatin modification-related protein MEAF6.
    
 0.553
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.552
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.551
WRN
Werner syndrome ATP-dependent helicase.
    
 0.532
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 0.509
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.480
ARID4A
AT-rich interactive domain-containing protein 4A.
   
 0.477
ARID4B
AT-rich interactive domain-containing protein 4B.
   
 0.477
MRGBP
MRG/MORF4L-binding protein.
    
 0.441
BRPF3
Bromodomain and PHD finger-containing protein 3.
    
 0.423
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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