STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFE2L3Nuclear factor erythroid 2-related factor 3. (463 aa)    
Predicted Functional Partners:
MAFG
Transcription factor MafG.
    
 0.927
MAFK
Transcription factor MafK.
    
 0.920
MAFF
Transcription factor MafF.
    
 0.864
GSK3B
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
    
 0.834
CUL3
Cullin-3; Belongs to the cullin family.
    
 0.800
KLHL17
Kelch-like protein 17.
    
 0.757
CUL1
Cullin-1; Belongs to the cullin family.
    
 0.671
RBX1
E3 ubiquitin-protein ligase RBX1.
   
 0.670
KLHL18
Kelch-like protein 18.
    
 0.669
KLHL20
Kelch-like protein 20.
    
 0.669
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.