STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DYNLL1Dynein light chain. (246 aa)    
Predicted Functional Partners:
DYNLRB1
Dynein light chain roadblock.
   
 0.851
DYNC1I2
Cytoplasmic dynein 1 intermediate chain 2.
   
 0.814
DYNC1I1
Cytoplasmic dynein 1 intermediate chain 1.
   
 0.814
NUP214
Nuclear pore complex protein Nup214.
    
 
 0.758
WDR60
WD repeat-containing protein 60.
    
 0.752
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.751
DYNC1H1
Cytoplasmic dynein 1 heavy chain 1.
    
 0.742
WDR34
WD repeat-containing protein 34.
    
 0.734
DYNC2LI1
Cytoplasmic dynein 2 light intermediate chain 1.
    
 0.690
BMF
Bcl-2-modifying factor.
    
 0.690
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.