STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110471621Ankyrin repeat and SOCS box protein 9. (294 aa)    
Predicted Functional Partners:
CUL5
Cullin-5; Belongs to the cullin family.
    
 0.932
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 0.923
ELOB
Transcription elongation factor B polypeptide 2.
    
 0.917
HIF1AN
Hypoxia-inducible factor 1-alpha inhibitor.
    
 
 0.845
ASB6
Ankyrin repeat and SOCS box protein 6.
    
 0.707
CKM
Creatine kinase M-type; Belongs to the ATP:guanido phosphotransferase family.
   
 
 0.637
CKB
Creatine kinase B-type; Belongs to the ATP:guanido phosphotransferase family.
   
 
 0.637
NEURL2
Neuralized-like protein 2.
    
 0.586
NEDD8
Ubiquitin-like protein Nedd8.
    
  0.563
CKMT2
Creatine kinase S-type, mitochondrial; Belongs to the ATP:guanido phosphotransferase family.
   
 
 0.551
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.