STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC90BCoiled-coil domain-containing protein 90B, mitochondrial. (252 aa)    
Predicted Functional Partners:
MCUR1
Mitochondrial calcium uniporter regulator 1.
   
   0.853
ANKRD42
Ankyrin repeat domain-containing protein 42.
      
 0.798
NOB1
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 
 0.725
TRMT1L
TRMT1-like protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.692
FAM32A_0
Protein FAM32A.
   
  
 0.642
FAM32A
Protein FAM32A.
   
  
 0.642
NIPAL2
NIPA-like protein 2.
      
 0.598
ALG6
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.585
RAB30
Ras-related protein Rab-30.
      
 0.584
TMX1
Thioredoxin-related transmembrane protein 1.
      
 0.576
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (26%) [HD]