STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001232annotation not available (269 aa)    
Predicted Functional Partners:
MTREX
Superkiller viralicidic activity 2-like 2.
   
 
 0.828
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.744
RPF2
Ribosome production factor 2.
   
 
 0.737
NIFK
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
 
 0.713
UBXN7
UBX domain-containing protein 7.
   
 0.713
UTP14A
U3 small nucleolar RNA-associated protein 14 A.
   
  
 0.703
MAK16
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.697
NOC3L
Nucleolar complex protein 3 homolog.
   
  
 0.670
GNL3
Guanine nucleotide-binding protein-like 3.
   
 
 0.669
DDX56
Putative ATP-dependent RNA helicase DDX56.
   
 
 0.663
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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