Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
BFARBifunctional apoptosis regulator. (448 aa)    
Predicted Functional Partners:
PDXDC1
Pyridoxal-dependent decarboxylase domain-containing protein 1.
      
 0.697
CRADD
Death domain-containing protein CRADD.
      
 0.587
CAAP1
Caspase activity and apoptosis inhibitor 1.
      
 0.567
ZC3H12A
Ribonuclease ZC3H12A.
      
 0.539
BIRC6
Baculoviral IAP repeat-containing protein 6.
   
 0.516
BID
BH3-interacting domain death agonist; Counters the protective effect of Bcl-2.
      
 0.516
NUDCD1
NudC domain-containing protein 1.
    
 
 0.505
LIG3
DNA ligase.
      
 0.485
TP53BP1
Tumor suppressor p53-binding protein 1.
    
 0.464
REEP3
Receptor expression-enhancing protein.
      
 0.455
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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