STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FLI1Friend leukemia integration 1 transcription factor. (437 aa)    
Predicted Functional Partners:
GATA2
GATA-binding factor 2.
   
 0.669
SPI1
Transcription factor PU.1.
   
0.625
TAL1
T-cell acute lymphocytic leukemia protein 1.
    
 0.621
EWSR1
RNA-binding protein EWS.
   
 
 0.555
CBFB
Core-binding factor subunit beta.
    
 0.541
RUNX3
Runt-related transcription factor 3.
   
 0.474
RUNX1
Runt-related transcription factor 1.
   
 0.474
ENSLSDP00000008165
annotation not available
   
 0.474
RUNX2
Runt-related transcription factor 2.
   
 0.474
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.469
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.