Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATG101Autophagy-related protein 101. (336 aa)    
Predicted Functional Partners:
ULK1
Serine/threonine-protein kinase ULK1.
    
 0.999
RB1CC1
RB1-inducible coiled-coil protein 1.
   
 0.999
ATG13
Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily.
    
 0.999
ULK2
Serine/threonine-protein kinase ULK2.
    
 0.997
ATG14
Beclin 1-associated autophagy-related key regulator.
    
 0.976
RPTOR
Regulatory-associated protein of mTOR.
     
 0.975
MTOR
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
     
 0.975
MLST8
Target of rapamycin complex subunit lst8.
     
 0.964
BECN1
Beclin-1.
    
 0.917
PPP2CA
Serine/threonine-protein phosphatase.
   
 
  0.901
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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