Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LRRC39-2Leucine-rich repeat-containing protein 39. (309 aa)    
Predicted Functional Partners:
CPN2
Carboxypeptidase N subunit 2.
  
     0.527
CLDN23
Claudin-23.
      
 0.525
DCN
Decorin; May affect the rate of fibrils formation.
  
     0.502
PRELP
Prolargin.
  
     0.491
ASPN
Asporin.
  
     0.484
NRROS
Negative regulator of reactive oxygen species.
  
     0.483
OMD
Osteomodulin.
  
     0.473
KERA
Keratocan.
  
     0.472
LRRC20
Leucine-rich repeat-containing protein 20.
  
     0.457
LRRTM4
Leucine-rich repeat transmembrane neuronal protein 4.
  
   0.455
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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