STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL3Oxysterol-binding protein; Belongs to the OSBP family. (888 aa)    
Predicted Functional Partners:
VAPB
Vesicle-associated membrane protein-associated protein B.
    
 
 0.589
GAK
Cyclin-G-associated kinase.
   
 
 0.554
VAPA
Vesicle-associated membrane protein-associated protein A.
    
 
 0.471
PDE11A
Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A isoform X1.
      
 0.456
MOSPD1
Motile sperm domain-containing protein 1.
    
 
 0.425
CASP9
Caspase 9.
      
 0.423
APAF1
Apoptotic protease-activating factor 1.
      
 0.423
NDUFA12
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
  
 0.411
MTDH
Protein LYRIC.
      
 0.408
AGBL5
Cytosolic carboxypeptidase-like protein 5.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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