STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL1ADP-ribosylation factor-like protein 1; Belongs to the small GTPase superfamily. Arf family. (181 aa)    
Predicted Functional Partners:
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.932
GBF1
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1.
    
 0.905
GOLGA4
Golgin subfamily A member 4.
    
 0.903
MON2
Protein MON2.
    
 
 0.899
STX16
Syntaxin-16; Belongs to the syntaxin family.
    
 0.897
SCOC
Short coiled-coil protein.
   
 
 0.892
RAB6A
Ras-related protein Rab-6A isoform X1.
   
 0.886
RAB41
Ras-related protein Rab-6A.
   
 0.886
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.878
CIAO1
Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family.
      
 0.874
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (42%) [HD]