STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRADDTumor necrosis factor receptor type 1-associated DEATH domain protein. (306 aa)    
Predicted Functional Partners:
FADD
FAS-associated death domain protein.
   
 0.999
LOC110480833
Tumor necrosis factor receptor superfamily member 1A.
    
 0.999
RIPK1
Receptor-interacting serine/threonine-protein kinase 1.
    
0.999
TRAF2
TNF receptor-associated factor.
    
 0.996
BIRC2
Inhibitor of apoptosis protein.
   
 0.992
CASP8
Caspase-8; Belongs to the peptidase C14A family.
   
 0.990
CASP8_0
Caspase-8; Belongs to the peptidase C14A family.
   
 0.988
CASP10
Caspase-10; Belongs to the peptidase C14A family.
   
 0.988
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.988
TRAF3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.987
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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