Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARID4A | ARID4B | ENSLSDP00000016845 | ENSLSDP00000023019 | AT-rich interactive domain-containing protein 4A. | AT-rich interactive domain-containing protein 4B. | 0.656 |
ARID4A | ENSLSDP00000001290 | ENSLSDP00000016845 | ENSLSDP00000001290 | AT-rich interactive domain-containing protein 4A. | annotation not available | 0.821 |
ARID4A | H2AZ1 | ENSLSDP00000016845 | ENSLSDP00000013755 | AT-rich interactive domain-containing protein 4A. | Histone H2A; Belongs to the histone H2A family. | 0.882 |
ARID4A | KDM6A | ENSLSDP00000016845 | ENSLSDP00000009060 | AT-rich interactive domain-containing protein 4A. | Lysine-specific demethylase 6A. | 0.519 |
ARID4A | LOC110469891 | ENSLSDP00000016845 | ENSLSDP00000024780 | AT-rich interactive domain-containing protein 4A. | Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. | 0.473 |
ARID4A | LOC110478279 | ENSLSDP00000016845 | ENSLSDP00000010778 | AT-rich interactive domain-containing protein 4A. | Histone H2A; Belongs to the histone H2A family. | 0.882 |
ARID4A | MACROH2A1 | ENSLSDP00000016845 | ENSLSDP00000010118 | AT-rich interactive domain-containing protein 4A. | Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. | 0.473 |
ARID4A | MYSM1 | ENSLSDP00000016845 | ENSLSDP00000025663 | AT-rich interactive domain-containing protein 4A. | Histone H2A deubiquitinase MYSM1. | 0.731 |
ARID4B | ARID4A | ENSLSDP00000023019 | ENSLSDP00000016845 | AT-rich interactive domain-containing protein 4B. | AT-rich interactive domain-containing protein 4A. | 0.656 |
ARID4B | ENSLSDP00000001290 | ENSLSDP00000023019 | ENSLSDP00000001290 | AT-rich interactive domain-containing protein 4B. | annotation not available | 0.821 |
ARID4B | H2AZ1 | ENSLSDP00000023019 | ENSLSDP00000013755 | AT-rich interactive domain-containing protein 4B. | Histone H2A; Belongs to the histone H2A family. | 0.882 |
ARID4B | KDM6A | ENSLSDP00000023019 | ENSLSDP00000009060 | AT-rich interactive domain-containing protein 4B. | Lysine-specific demethylase 6A. | 0.571 |
ARID4B | LOC110469891 | ENSLSDP00000023019 | ENSLSDP00000024780 | AT-rich interactive domain-containing protein 4B. | Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. | 0.473 |
ARID4B | LOC110478279 | ENSLSDP00000023019 | ENSLSDP00000010778 | AT-rich interactive domain-containing protein 4B. | Histone H2A; Belongs to the histone H2A family. | 0.882 |
ARID4B | MACROH2A1 | ENSLSDP00000023019 | ENSLSDP00000010118 | AT-rich interactive domain-containing protein 4B. | Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. | 0.473 |
ARID4B | MYSM1 | ENSLSDP00000023019 | ENSLSDP00000025663 | AT-rich interactive domain-containing protein 4B. | Histone H2A deubiquitinase MYSM1. | 0.741 |
ENSLSDP00000001290 | ARID4A | ENSLSDP00000001290 | ENSLSDP00000016845 | annotation not available | AT-rich interactive domain-containing protein 4A. | 0.821 |
ENSLSDP00000001290 | ARID4B | ENSLSDP00000001290 | ENSLSDP00000023019 | annotation not available | AT-rich interactive domain-containing protein 4B. | 0.821 |
ENSLSDP00000001290 | H2AZ1 | ENSLSDP00000001290 | ENSLSDP00000013755 | annotation not available | Histone H2A; Belongs to the histone H2A family. | 0.780 |
ENSLSDP00000001290 | HAT1 | ENSLSDP00000001290 | ENSLSDP00000015039 | annotation not available | Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. | 0.863 |
page 1 of 4