Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110480104Synaptotagmin-like protein 2. (953 aa)    
Predicted Functional Partners:
RAB27A
Ras-related protein Rab-27A.
   
 0.942
TBC1D10A
TBC1 domain family member 10A.
     
  0.572
MYRIP
Rab effector MyRIP.
     
 0.564
ITSN2
Intersectin-2.
     
 0.512
LHFPL2
Lipoma HMGIC fusion partner-like 2 protein.
     
 0.466
CAMK1G
Calcium/calmodulin-dependent protein kinase type 1G; Belongs to the protein kinase superfamily.
      
 0.433
RIMS2
Regulating synaptic membrane exocytosis protein 2.
     
 0.430
STON2
Stonin-2; Belongs to the Stoned B family.
   
 0.427
PHACTR3
Phosphatase and actin regulator.
     
 0.419
FNIP2
Folliculin-interacting protein 2.
      
 0.413
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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