Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COX6A1Cytochrome c oxidase subunit 6A1, mitochondrial. (116 aa)    
Predicted Functional Partners:
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.998
LOC110482504
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.998
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.998
LOC110470070
Cytochrome c oxidase subunit 6C-2.
   
 0.997
LOC110483970
Cytochrome c oxidase subunit 7A2, mitochondrial.
   
 0.996
UQCRB
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.995
COX8B
Cytochrome c oxidase subunit 8B, mitochondrial.
   
 0.994
LOC110474142
Cytochrome b-c1 complex subunit 9.
   
 0.994
LOC110474501
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.993
ENSLSDP00000001112
annotation not available
   
 0.992
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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