Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110483333Peripheral plasma membrane protein CASK-like. (98 aa)    
Predicted Functional Partners:
CASK_1
Peripheral plasma membrane protein CASK.
 
  
 0.959
CASK
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
 
  
 0.959
MPP1
Erythrocyte membrane protein; Belongs to the MAGUK family.
 
  
  0.941
APBA1
Amyloid beta A4 protein-binding family A member 1.
   
 0.919
APBA3
Amyloid beta A4 protein-binding family A member 1.
   
 0.897
APBA2
Amyloid beta A4 protein-binding family A member 2.
   
 0.897
LIN7B
Protein lin-7 B.
    
 0.885
LIN7C
Protein lin-7 homolog C isoform X1.
    
 0.885
LIN7A
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.885
MPP6
MAGUK p55 subfamily member 6; Belongs to the MAGUK family.
 
  
  0.867
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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