Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DNM1Dynamin-1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. (868 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
   
 0.930
CTTN
Src substrate protein p85.
    
 0.926
LOC110479573
Src substrate cortactin.
    
 0.926
DNM2
Dynamin-2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
  
  
 
0.901
DNM3
Dynamin-3 isoform X1.
  
  
 
0.900
ITSN2
Intersectin-2.
    
 
 0.832
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
   
 0.754
ITSN1
Intersectin-1.
    
 
 0.746
SNX9
Sorting nexin.
    
 0.699
SH3GL1
Endophilin-A2.
   
 0.652
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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