STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSF4Heat shock factor protein 4. (509 aa)    
Predicted Functional Partners:
PTGES3
Prostaglandin E synthase 3.
    
 0.600
HSPA8
Heat shock cognate protein.
    
 0.595
HSPA2
Heat shock protein; Belongs to the heat shock protein 70 family.
    
 0.595
LDLRAD1
Low-density lipoprotein receptor class A domain-containing protein 1.
    
 0.595
TMEM59
Transmembrane protein 59.
    
 0.595
HSBP1
Heat shock factor-binding protein 1.
    
 0.583
SIRT1
NAD-dependent protein deacetylase sirtuin-1.
   
 0.560
LOC110476439
Heat shock protein HSP 90-alpha.
    
 0.558
LOC110481174
Heat shock protein HSP 90-alpha.
    
 0.558
ENSLSDP00000014316
annotation not available
    
 0.558
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.