STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCEIQ domain-containing protein E. (678 aa)    
Predicted Functional Partners:
EFCAB7
EF-hand calcium-binding domain-containing protein 7.
   
 0.874
ENSLSDP00000008068
annotation not available
   
  0.797
EVC2
Ellis van creveld syndrome protein 2.
     
 0.672
NAV1
Neuron navigator 1.
    
 0.573
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
 
  0.563
TTC34
Tetratricopeptide repeat protein 34.
   
    0.545
RPL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.537
DLG5
Disks large 5; Belongs to the MAGUK family.
      
 0.522
BAHCC1
BAH and coiled-coil domain-containing protein 1.
      
 0.471
KCTD2
BTB/POZ domain-containing protein KCTD2.
    
 0.460
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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