STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C3General transcription factor 3C polypeptide 3. (913 aa)    
Predicted Functional Partners:
GTF3C4
General transcription factor 3C polypeptide 4.
   
 0.999
GTF3C1
General transcription factor 3C polypeptide 1.
   
 0.999
GTF3C2
General transcription factor 3C polypeptide 2.
    
 0.999
GTF3C5
General transcription factor 3C polypeptide 5.
   
 0.998
GTF3C6
General transcription factor 3C polypeptide 6.
    
 0.987
BRF1
Transcription factor IIIB subunit.
    
 0.984
LOC110475045
Transcription factor TFIIIB component B'' homolog.
   
 0.959
LOC110474059
Transcription factor TFIIIB component B.
   
 0.916
BRF2
Transcription factor IIIB subunit.
    
 0.914
ENSLSDP00000022078
annotation not available
    
 0.888
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.