STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAAF1Dynein assembly factor 1, axonemal. (591 aa)    
Predicted Functional Partners:
DNALI1
Axonemal dynein light intermediate polypeptide 1.
  
  
 0.717
ZMYND10
Zinc finger MYND domain-containing protein 10.
  
 
 0.676
DNAI2
Dynein intermediate chain 2, axonemal.
    
 
 0.663
RSPH9
Radial spoke head protein 9.
   
 0.611
DNAI1
Dynein intermediate chain 1, axonemal.
    
 
 0.611
CFAP298
UPF0769 protein C21orf59.
      
 0.578
DNAAF2
Protein kintoun.
      
 0.573
CCDC103
Coiled-coil domain-containing protein 103.
   
  
 0.567
RSPH4A
Radial spoke head protein 4 A.
      
 0.561
CCDC40
Coiled-coil domain-containing protein 40.
    
 
 0.557
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.