Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHTF18Chromosome transmission fidelity protein 18. (522 aa)    
Predicted Functional Partners:
DSCC1
Sister chromatid cohesion protein DCC1.
   
 0.998
CHTF8
Chromosome transmission fidelity protein 8.
   
 0.995
RFC4
Replication factor C subunit 4.
   
 0.992
RFC3
Replication factor C subunit 3.
   
 0.989
RFC2
Replication factor C subunit 2.
   
 0.988
RFC5
Replication factor C subunit 5.
   
 0.986
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.985
WDHD1
WD repeat and HMG-box DNA-binding protein 1.
   
 
 0.968
POLE2
DNA polymerase epsilon subunit 2.
   
 
 0.959
POLA1
DNA polymerase.
   
 0.954
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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