Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CUNH8orf33UPF0488 protein C8orf33. (391 aa)    
Predicted Functional Partners:
LYAR
Cell growth-regulating nucleolar protein.
   
   0.658
REXO4
RNA exonuclease 4.
   
   0.634
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.607
RPL18A
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.579
RPL14
60S ribosomal protein L14.
    
   0.575
LACTB2
Beta-lactamase-like protein 2.
      
 0.568
KNOP1
Lysine-rich nucleolar protein 1.
    
   0.565
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
   0.562
RRP8
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
   0.529
RPL26L1
60S ribosomal protein L26.
    
   0.500
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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