STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LFNGBeta-1,3-N-acetylglucosaminyltransferase. (373 aa)    
Predicted Functional Partners:
NOTCH1
Neurogenic locus notch 1.
    
 0.958
NOTCH2
Neurogenic locus notch 2.
    
 0.927
MFNG
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
  
  
 
0.904
RFNG
Beta-1,3-N-acetylglucosaminyltransferase radical fringe.
  
  
 
0.902
NELFB
Negative elongation factor B.
   
 0.599
LHX9
LIM/homeobox protein Lhx9.
    
 
 0.597
LHX2
LIM/homeobox protein Lhx2.
    
 
 0.597
LMO3
LIM domain only protein 3.
    
 
 0.561
LMO1
Rhombotin-1.
    
 
 0.561
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
    
 
 0.555
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.