STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001381annotation not available (162 aa)    
Predicted Functional Partners:
C1QC
Complement C1q subcomponent subunit C isoform X2.
  
  0.561
ENSLSDP00000011214
annotation not available
  
 
  0.555
ENSLSDP00000015473
annotation not available
  
     0.539
ENSLSDP00000022436
annotation not available
  
     0.534
OTOL1
Otolin-1.
  
     0.525
C1QTNF2
Complement C1q tumor necrosis factor-related protein 2.
  
     0.524
C1QTNF9
Complement C1q and tumor necrosis factor-related protein 9A.
  
 
   0.524
C1QTNF7
Complement C1q tumor necrosis factor-related protein 7.
  
     0.523
COL8A2
Collagen type VIII alpha 2 chain.
  
  
  0.516
COLEC10
Collectin-10.
  
 
  0.514
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.