STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A8Putative sodium-coupled neutral amino acid transporter 8. (411 aa)    
Predicted Functional Partners:
SLC38A9
Sodium-coupled neutral amino acid transporter 9.
      
0.579
RIMS2
Regulating synaptic membrane exocytosis protein 2.
   
 
 0.573
LAMTOR2
Ragulator complex protein LAMTOR2.
    
 0.555
LAMTOR1
Ragulator complex protein LAMTOR1.
    
 0.488
LAMTOR5
Ragulator complex protein LAMTOR5.
    
 0.481
IL4
Interleukin-4.
   
 0.479
LOC110467892
Ras-related GTP-binding protein A.
   
 0.479
ZBTB43
Zinc finger and BTB domain-containing protein 43.
    
 0.439
RRAGD
Ras-related GTP-binding protein D.
    
 0.409
RRAGC
Ras-related GTP-binding protein C.
    
 0.409
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.