STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MPP6MAGUK p55 subfamily member 6; Belongs to the MAGUK family. (540 aa)    
Predicted Functional Partners:
LOC110483333
Peripheral plasma membrane protein CASK-like.
 
  
  0.867
ENSLSDP00000009418
annotation not available
 
  
  0.867
CDA
Cytidine deaminase isoform X1.
   
 
 0.721
LIN7B
Protein lin-7 B.
    
 0.599
LIN7C
Protein lin-7 homolog C isoform X1.
    
 0.599
LIN7A
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
    
 0.599
APBA1
Amyloid beta A4 protein-binding family A member 1.
   
 0.598
APBA3
Amyloid beta A4 protein-binding family A member 1.
   
 0.598
APBA2
Amyloid beta A4 protein-binding family A member 2.
   
 0.598
SDC2
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.505
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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