Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM71Transmembrane protein 71. (322 aa)    
Predicted Functional Partners:
TRIM14
Tripartite motif-containing protein 14.
      
 0.581
KLHL31
Kelch-like protein 31.
      
 0.489
DCST1
E3 ubiquitin-protein ligase DCST1.
      
 0.474
RAB42
LOW QUALITY PROTEIN: ras-related protein Rab-42-like.
      
 0.467
CCDC18
Coiled-coil domain-containing protein 18.
      
 0.467
KLHDC8A
Kelch domain-containing protein 8A.
      
 0.464
ARFIP1
Arfaptin-1.
      
 0.433
UTS2
Urotensin 2.
      
 0.417
HIBCH
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
      
 0.415
KIF21B
Kinesin-like protein KIF21B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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