Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000001396Interferon regulatory factor 9-like. (60 aa)    
Predicted Functional Partners:
TYK2-2
Tyrosine-protein kinase.
     
  0.900
JAK1
Tyrosine-protein kinase JAK1.
     
  0.900
STAT3
Signal transducer and activator of transcription.
     
  0.900
LOC110471843
Signal transducer and activator of transcription.
     
  0.900
STAT4
Signal transducer and activator of transcription.
     
  0.900
STAT1
Signal transducer and activator of transcription.
     
  0.900
STAT2
Signal transducer and activator of transcription.
     
  0.900
STAT6
Signal transducer and activator of transcription.
     
  0.900
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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