STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CIZ1Cip1-interacting zinc finger protein. (703 aa)    
Predicted Functional Partners:
ERH
Enhancer of rudimentary homolog; May have a role in the cell cycle.
    
 
 0.880
ATF6
Cyclic AMP-dependent transcription factor ATF-6 alpha.
      
 0.685
FBN1
Fibrillin-1.
   
 0.605
CEBPD
CCAAT/enhancer-binding protein delta.
   
 
 0.604
HSPB1
Heat shock protein family B (small) member 1.
    
 
 0.595
PRDM1
PR domain zinc finger protein 1.
     
 0.587
SNAI2
Zinc finger protein SNAI2.
      
 0.581
GPSM2
G-protein-signaling modulator 2.
    
 
 0.580
TRARG1
Tumor suppressor candidate 5.
    
 0.580
NFATC1
Nuclear factor of activated T-cells, cytoplasmic 1.
      
 0.579
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.