Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHF20L1PHD finger protein 20-like protein 1. (1042 aa)    
Predicted Functional Partners:
KANSL1
KAT8 regulatory NSL complex subunit 1.
   
 0.990
KANSL3
KAT8 regulatory NSL complex subunit 3.
    
 0.983
KANSL2
KAT8 regulatory NSL complex subunit 2.
    
 0.965
KANSL1L
KAT8 regulatory NSL complex subunit 1-like protein.
   
 0.956
KAT8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.895
GATAD2B
Transcriptional repressor p66-beta.
   
 
 0.884
GATAD2A
Transcriptional repressor p66-alpha.
   
 
 0.867
ENSLSDP00000011424
annotation not available
   
 
 0.867
BCL11A
B-cell lymphoma/leukemia 11A.
    
  0.858
WDR5
WD repeat-containing protein 5.
    
 0.783
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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