STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110484624Baculoviral IAP repeat-containing protein 5.1. (122 aa)    
Predicted Functional Partners:
CDCA8
Cell division cycle associated 8.
   
 0.988
DIABLO
Diablo, mitochondrial.
    
 0.979
INCENP
Inner centromere protein.
   
 0.969
CASP3
Caspase-3; Belongs to the peptidase C14A family.
   
 0.955
CASP9
Caspase 9.
   
 0.955
CASP7
Caspase-7; Belongs to the peptidase C14A family.
   
 0.946
SEPTIN4
Septin-4; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Septin GTPase family.
    
  0.930
HTRA2
Serine protease HTRA2, mitochondrial.
    
 0.925
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.921
CDC20
Cell division cycle protein 20.
   
 0.908
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.