STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC12Coiled-coil domain-containing protein 12. (176 aa)    
Predicted Functional Partners:
SYF2
Pre-mRNA-splicing factor SYF2.
    
  0.994
CDC40
Pre-mRNA-processing factor 17.
    
  0.988
PPIL1
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.987
YJU2
Coiled-coil domain-containing protein 94.
    
  0.977
CWC22
Pre-mRNA-splicing factor CWC22.
    
  0.976
DHX8
ATP-dependent RNA helicase DHX8.
    
  0.974
CWF19L2
CWF19-like protein 2.
    
 0.971
CACTIN
Cactin.
   
  0.964
PPWD1
Peptidylprolyl isomerase domain and WD repeat-containing protein 1.
    
 0.964
CRNKL1
Crooked neck-like protein 1.
    
  0.962
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.