STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAPLN1_0Hyaluronan and proteoglycan link protein 1. (233 aa)    
Predicted Functional Partners:
HAPLN4
Hyaluronan and proteoglycan link protein 4.
 
     0.857
CENPM
Centromere protein M.
      
 0.582
TM6SF1
Transmembrane 6 superfamily member 1.
      
 0.580
KCNS2
Potassium voltage-gated channel subfamily S member 2; Belongs to the potassium channel family.
   
  
 0.531
TPRG1L
Tumor protein p63-regulated gene 1-like protein.
      
 0.451
CILP2
Cartilage intermediate layer protein 2.
  
   
 0.436
SSTR1
Somatostatin receptor type 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.418
SSTR4
Somatostatin receptor type 4; Belongs to the G-protein coupled receptor 1 family.
      
 0.418
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.