Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC126Coiled-coil domain-containing protein 126. (139 aa)    
Predicted Functional Partners:
LRIT2
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
      
 0.872
DIPK1A
Protein FAM69A.
      
 0.682
ABHD13
Alpha/beta hydrolase domain-containing protein 13.
      
 0.682
FAM169A
Soluble lamin-associated protein.
      
 0.653
DPY19L3
Putative C-mannosyltransferase DPY19L3.
      
 0.635
ENOX1
Ecto-NOX disulfide-thiol exchanger 1.
      
 0.605
GRIFIN
Galectin.
      
 0.572
LRIT1
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
      
 0.543
CUNH5orf22
UPF0489 protein C5orf22.
      
 0.542
MOXD1
DBH-like monooxygenase protein 1.
      
 0.522
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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