STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPK2-2Receptor-interacting serine/threonine-protein kinase 2. (570 aa)    
Predicted Functional Partners:
XIAP
E3 ubiquitin-protein ligase XIAP.
   
 0.913
NOD1
Nucleotide-binding oligomerization domain-containing protein 1.
   
 0.884
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.732
TAB3
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3.
    
 0.643
TAB2
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2.
    
 0.624
TAB1
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1.
   
 0.623
UBE2N
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.609
FADD
FAS-associated death domain protein.
   
 0.602
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
 
0.598
TRADD
Tumor necrosis factor receptor type 1-associated DEATH domain protein.
    
 0.586
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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