STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRA2ATransformer-2 alpha. (275 aa)    
Predicted Functional Partners:
TRA2B
Transformer-2 beta.
   
   0.993
SRSF10
Serine/arginine-rich splicing factor 10.
   
 0.963
SRSF3
Serine/arginine-rich splicing factor 3.
   
 0.957
SRSF1
Serine/arginine-rich splicing factor 1.
   
 0.937
SRSF2
Serine/arginine-rich splicing factor 2.
  
0.904
DHX15
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 
 0.891
U2SURP
U2 snRNP-associated SURP motif-containing protein.
   
   0.891
PPIG
Peptidyl-prolyl cis-trans isomerase G.
   
 0.864
LOC110474841
Serine/arginine-rich splicing factor 7.
   
 0.850
SRSF7
Serine/arginine-rich splicing factor 7.
   
 0.850
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.