Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110470230Noggin-2-like. (210 aa)    
Predicted Functional Partners:
NOG
Noggin.
  
  
 
0.902
BMP4
Bone morphogenetic protein 4.
    
 0.808
BMP2
Bone morphogenetic protein 2.
    
 0.808
LOC110469508
Bone morphogenetic protein 2.
    
 0.808
CHRD
Chordin; Belongs to the chordin family.
      
 0.791
BMP5
Bone morphogenetic protein 5.
    
 0.751
BMP6
Bone morphogenetic protein 6.
    
 0.751
BMP7
Bone morphogenetic protein 7.
    
 0.751
LOC110475579
Bone morphogenetic protein 7.
    
 0.750
GDF6
Growth/differentiation factor 6.
    
 0.708
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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