STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGES2Prostaglandin E synthase 2. (353 aa)    
Predicted Functional Partners:
PTGES3
Prostaglandin E synthase 3.
     
 0.969
PTGES
Prostaglandin E synthase.
     
 0.968
PTGS2
Prostaglandin G/H synthase 2.
     
 0.951
PTGS1
Prostaglandin G/H synthase 1.
     
 0.950
TBXAS1
Thromboxane-A synthase; Belongs to the cytochrome P450 family.
     
 0.939
HPGD
15-hydroxyprostaglandin dehydrogenase [NAD(+)]; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.931
HPGDS
Hematopoietic prostaglandin D synthase.
     
 0.930
LOC110472190
Lipocalin; Belongs to the calycin superfamily. Lipocalin family.
     
 0.928
LOC110475373
Carbonyl reductase [NADPH] 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.905
TWNK
Twinkle protein, mitochondrial.
    
   0.761
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.