Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NXT2NTF2-related export protein 2. (141 aa)    
Predicted Functional Partners:
NXF1
Nuclear RNA export factor 1.
    
 0.995
NUP214
Nuclear pore complex protein Nup214.
    
 0.923
GLE1
Nucleoporin GLE1.
    
 0.919
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
 0.898
RANBP1
Ran-specific GTPase-activating protein.
   
 0.876
KPNB1
Importin subunit beta-1.
    
 
 0.858
RAE1
mRNA export factor.
   
 
 0.820
THOC5
THO complex subunit 5.
     
 0.801
THOC3
THO complex subunit 3.
   
 
 0.801
THOC1
THO complex subunit 1.
   
 
 0.800
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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