STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NXT2NTF2-related export protein 2. (141 aa)    
Predicted Functional Partners:
NXF1
Nuclear RNA export factor 1.
    
 0.999
LOC110478774
E3 SUMO-protein ligase RanBP2.
   
 0.962
RAE1
mRNA export factor.
   
 
 0.847
NUP214
Nuclear pore complex protein Nup214.
    
 0.816
NUP98
Nuclear pore complex protein Nup98-Nup96.
     
 0.789
DDX39B
Spliceosome RNA helicase Ddx39b.
   
 
 0.779
GLE1
Nucleoporin GLE1.
    
 0.743
THOC5
THO complex subunit 5.
     
 0.718
NUP153
Nuclear pore complex protein Nup153.
     
 0.707
NUP155
Nuclear pore complex protein Nup155.
     
 0.705
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.