STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A10Zinc transporter ZIP10. (864 aa)    
Predicted Functional Partners:
SLC30A4
Zinc transporter 4.
   
 0.569
NUDT16L1
Protein syndesmos.
      
 0.558
METTL9
Methyltransferase-like protein 9.
    
 
 0.551
TXNRD2
Thioredoxin reductase 2, mitochondrial.
      
 0.509
SLC30A7
Zinc transporter 7.
  
 0.487
SLC30A1
Zinc transporter 1.
  
 0.484
SLC1A1
Amino acid transporter.
  
 
 0.470
SLC30A6
Zinc transporter 6.
  
 0.466
SLC6A6
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
  
 
 0.466
SLC30A5
Zinc transporter 5.
  
 0.456
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.