Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
JMYJunction-mediating and-regulatory protein. (908 aa)    
Predicted Functional Partners:
ENSLSDP00000011509
annotation not available
     
 0.689
COBL
Protein cordon-bleu.
    
 0.606
FMN2
Formin-2.
    
 
 0.583
FMN1
Formin.
    
 
 0.583
CUNH16orf70
UPF0183 protein C16orf70.
      
 0.571
FASTK
Fas activated serine/threonine kinase.
      
 0.566
LOC110473425
Rhodopsin.
     
 0.550
RHO
Rhodopsin.
     
 0.550
LOC110477152
Green-sensitive opsin-like.
     
 0.550
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
  0.488
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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